rs263900246 SNP Detail

Summary

• ID
  rs263900246
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24174409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGACACCT TCTGAGCCAG
  GACACCAGCC ATGTAGGTTG TTGCTTTGGA AAAGGTTTCT CACAGTGTCA TGGACAATGT
  CAGTGTCATC ACAGAGATCC CTGCTTTTAG CCTGCTTTCC CTTAGAGTAT CCTCCTGGAC
  CTAGCTACAG GGTGGGAGAC AGAAACTAAC CAGGAGACAA CTGATTGAAG TTCATATGTC
  Y
  CTGATATTAG TTGCAAATCT CCTGGTTGTC AGTGCTAGAA TGGCCCCTGG GACGGGCTTA
  GGAGGAAAGG GGGTTGGGGT GGGGTATTTA CTGGTTCACA CAGTAGTTCT TCCTCAGGGG
  AAAGGCTCCT GGCTTCCCTT CTTAGGGATC CCATGTTGAT CCTTTAACCA GTCAGAGGGA
  CAAGTAGACT GATGAGCCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323597977	CHEV_11_24124409	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263900246					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24174409 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	1864 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	307 bp upstream