rs263943993 SNP Detail

Summary

• ID
  rs263943993
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:88119661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGACTTG AGAAACTTCC CTCTATCTGA
  TAATGATGTG CAGCACAGCT TGTTCACTGA TCAGAATTCA ATTGGCTTTG CTTATGCCAA
  AGGGACAGTA GACAATCCAA AGAGCAATAC TTCACCCTCC TCTGAAATTA TTCAGGATAT
  R
  CCTGCTGTTT CCAGGTTTGC ACCTAATTCC CAAATAAGAC AGAGAAGGAT AAGGATGCCT
  CTTTCTAGGG AAAATGGCAT TTCATCTCCT GTGTCAGTGA CCTACTACCA GTACGAGTTT
  GAACCCGCTG ATACTCCTCA CTTTGATAGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321600775	CHEV_5_88400827	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263943993					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:88119661 () rs orientation: forward

Symbol	Name	Function Class
1700066N21Rik	RIKEN cDNA 1700066N21 gene	within coordinates
2310003L06Rik	RIKEN cDNA 2310003L06 gene	within coordinates
Gm28434	predicted gene 28434	within coordinates
Rr378253	regulatory region 378253	1699 bp downstream