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rs263998555 SNP Detail
Summary
  • ID
    rs263998555
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr2:41384695 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      GATAACATA TTGGTTTATA GAGGCCTCCA
    GAGCTCTTTT AAGCTGGAAC TGTCTGTAAG AGGTTGACAA GCACCACATG TTGGTGGCTC
    AGCATTCTCA GGATGAGAAT AGAAGGGTTT GCCAAACCTG AGACCTCAGA TCATctagat
    Y
    tgcttgcttg cctccaggaa gccagaagtc ccacctattc tccctagctc attggctgct
    ggcatcttta ttgatggatc aacaaccaat tagtgagtag tacattagca ttagaaacac
    ccccCCCCCC CCTTACAGTG TAAGTGAAAA                                 
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss320246506 CHEV_2_41350203 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs263998555 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:41384695 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
D2Mit371 DNA segment, Chr 2, Massachusetts Institute of Technology 371 505 bp proximal
Gm74545 predicted gene, 74545 240 bp upstream
Lrp1b low density lipoprotein-related protein 1B Intron
Noncoding-Transcript-Variant

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory