rs263999096 SNP Detail

Summary

• ID
  rs263999096
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13336148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGATTGTA CTTGACGGTA
  GCTACCTTTA CCTGTAAAGC CATCCCACTG GCCCCAAAAT GAAAAAATCC TCAACTAACA
  CTGGACAGTC CAGTTGACCT CAAGAATTGG TATAGGCTTG CCTGGCCTGG AACTTGCTAT
  ATAGACCAGG ATGACCTTGA ATCTAGATTA CTGCCTGACC CTGACTTCCA AGTGCTGGGA
  K
  TAAAAGTATG TGTCAGGAAT GGAACTCAGA TCCTCTGGAA AACAAGCAAT TGGTGCTGAG
  CCAACAATTC AGGCTGGAGT GGCAGATTTT ACTTTACGCT TTTGGTCAAT TAAATTGCAA
  TAAAATATTA CACTTAGAAA AAAGACCATC AAGAAGAGAC TAGCAGAACT CCTTCAGGGA
  CAACCTTTTA GGGGGACATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505817	CHEV_8_13286148	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263999096					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13336148 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	within coordinates
Cpgi20111	CpG island 20111	930 bp proximal
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Rr659903	regulatory region 659903	732 bp proximal
Rr659904	regulatory region 659904	1252 bp proximal
Rr659905	regulatory region 659905	1675 bp proximal
Tssr76388	transcription start site region 76388	1739 bp upstream
Tssr80437	transcription start site region 80437	1666 bp downstream