rs264044073 SNP Detail

Summary

• ID
  rs264044073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:95394895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTGAGAC TTCTGGCTAC
  CCGCACCTAT TTCTTTGAAG CATAGTCGCA AAAGTTGTGT AGCAGAAGAT AGCCTTGAAC
  TGCTGATTTT CCCGCCTCAG GTCCTGGGAA TTAGTCTTGG GCCACCATGT CTAAGCTTTT
  TGTTAATTGA AGGGAAGCGG GGAATGAGTA AGTTTGGTTT GATTTGGGTT TTTCCAGTTT
  R
  TCGGCATTCC ACCCCTGGCT GTCCCTGTGC TGTAGACCAG GCTGACCTCA AACTCGGAGA
  TCTGTCTCCC AAGTGCTGGG AGAAAACGTG TGTGCCATCA CCTAGATTTC AGTTACAGAT
  AAGGGTCAGA CCTAGAGAAG AGGCTCAGAA TTGGAGATGT GTGACAGGAC CTGAGAATGG
  AAATAAATTC ATTTGGGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323100846	CHEV_9_95413261	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264044073					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:95394895 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22151	CpG island 22151	250 bp distal
Gm28424	predicted gene 28424	within coordinates
Rr206888	regulatory region 206888	within coordinates
Rr383784	regulatory region 383784	within coordinates
Tssr86548	transcription start site region 86548	1553 bp downstream
Tssr90919	transcription start site region 90919	950 bp upstream
Tssr90920	transcription start site region 90920	934 bp upstream
U2surp	U2 snRNP-associated SURP domain containing	846 bp upstream