rs264075023 SNP Detail

Summary

• ID
  rs264075023
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:160866684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTATGAAA GAGAAAGCTG
  TCATGGTGGC TCAGTGAGTA ACAGCAACTG CCTCACAAGC CTGACGATCT GACTGTAATC
  CCAGGAATCC ATGGTAGAGA AACTCTGCTT CTGAATGCTG TACTTTAACC TCCATATATA
  AGCCACTATT GCACACAGAC ACACACACAC ACACAGAGGG GGGGGGAGGG GGAGAGGGGG
  R
  GGGGGAGAGG AGGGATGGTG AAATAATCGC AAGCCTAGAA TTTGTTGTTG ATTAGGACAA
  GAAGCTGGAA CTACCTCAAA GCCACTTCCC ATCAAAAGTT CTCCATTTTT CTCACTGACA
  TCATTCGCTT GACTTTTGAT ACCGGTATTG TGTATTTAGG CATTGGGCTA TTATGATCTA
  ACACATCCAC ATTATCATAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeH	C57BL/6J	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	FVB/NJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J
ss405042078	MGP_WTSI_X_158521620	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeH	C57BL/6J	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	FVB/NJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J
rs264075023					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss405042078	MGP_WTSI_X_158521620	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:160866684 () rs orientation: forward

Symbol	Name	Function Class
Nhs	NHS actin remodeling regulator	within coordinates
Rr694852	regulatory region 694852	1473 bp proximal
Tssr164496	transcription start site region 164496	1696 bp downstream