rs264088989 SNP Detail

Summary

• ID
  rs264088989
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152062706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    catcatgta ggtgctgtgg gccaaacccg
  ggttgtctga aagagcagtg agtgctttta gctgctgagc catcttgcca gAGTTCATCT
  TCATAGGAAT ATTTTTTCAT ATGAGTAGTA ATGGTCTCTG CACATTTTTC AGATTCTAAC
  Y
  GTTTCACTTA ATATTACGTT GGAGATCTTT GCATCTGGTT ATATAAACTC TTCTTTTATT
  TGCATACTAC CTCATTTTGG GTCTGTTGAT TTATCTAGTC ACCTTTGGAA AACACCATGT
  TGTATCTGGC CTTTGCTAAG ACATGCTGCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320062903	CHEV_1_154034085	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264088989					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152062706 () rs orientation: forward

Symbol	Name	Function Class
Gm53608	predicted gene, 53608	within coordinates
Rr420427	regulatory region 420427	188 bp distal