rs264095340 SNP Detail

Summary

• ID
  rs264095340
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36555752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCCCTCC CCACCCAACC
  GACCCCGGGC CCCAGACGCA CCACGTAGCG GCCCCCCAGC GCGTCTGGCC GCTGCTGGGA
  CACCGGGATG CAGAAGTGCA TCTTCATGGC TCTGGCGATG ACCAGGGACA GCGTGGAGAA
  CAGGACCTGC CGCCTAGAGT CTGGGCTGGG TCCTGAGCTC CCACTCCTGC CTTGGGTCTG
  M
  GGGTGGGCGG GGTCTGCGCC TGGCTCCGCC CCACCCCGCC CCGCTCCGCC CCGCCCCGCT
  CCCTCCACTA AACCTCAGCC TGATTCTCAG GCTGGACTAG AGACGTGCGC ACACAATCAG
  GGTTCAGAGG GACCTCAGGG ATGCCAGATC TCAGGCCAGG GTCACCCTGG AGGCCAGAGG
  CTGGAATTTT AGAGACTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324923063	CHEV_15_36485362	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264095340					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36555752 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7030	CpG island 7030	within coordinates
Rr311658	regulatory region 311658	within coordinates
Snx31	sorting nexin 31	34 bp upstream
Tssr134019	transcription start site region 134019	259 bp upstream
Tssr134020	transcription start site region 134020	68 bp upstream
Tssr134021	transcription start site region 134021	28 bp upstream
Tssr134022	transcription start site region 134022	15 bp upstream