rs264107670 SNP Detail

Summary

• ID
  rs264107670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69836424 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagagcact ggctagcaat cctagtgaga
  cactgtatcc atatacaagg gggaaaatgg ttgaagaaga tggctagtgt taacctttgg
  cttccaaatg ccacacacac acacacacac acacacacac acacacacac atttatgcgc
  R
  cacacatgaa cacacatata caGATGCATA TATAGCCCAA GAAAACAGGA CAATGGGTTA
  AAAATACAAA ATGAAAACAA GCTGGAAGCT CAAAACTCAA AAACTCTAGC AAAGTCGAGT
  TGTTTTAAAT TCTGCTTCTT AGAGACCCGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324085693	CHEV_12_70890637	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264107670					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69836424 () rs orientation: forward

Symbol	Name	Function Class
4930512B01Rik	RIKEN cDNA 4930512B01 gene	694 bp upstream
Cdkl1	cyclin dependent kinase like 1	within coordinates
Cpgi4702	CpG island 4702	822 bp proximal
Rr265514	regulatory region 265514	within coordinates
Tssr116527	transcription start site region 116527	605 bp downstream
Tssr116528	transcription start site region 116528	624 bp downstream
Tssr116529	transcription start site region 116529	631 bp downstream
Tssr116530	transcription start site region 116530	955 bp downstream
Tssr116531	transcription start site region 116531	1010 bp downstream
Tssr116532	transcription start site region 116532	1579 bp downstream
Tssr116533	transcription start site region 116533	1644 bp downstream
Tssr116534	transcription start site region 116534	1661 bp downstream
Tssr116535	transcription start site region 116535	1675 bp downstream
Tssr116536	transcription start site region 116536	1703 bp downstream