rs264142570 SNP Detail

Summary

• ID
  rs264142570
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:125221634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAGTTTAT TTAATATTAG
  TTCAGATTTA CTGTTTTATA ATTCATATTA GATTATGCTT GAAGATAGCA AAAATATCTG
  ACTATATGAG GAGAAACATA ATTTAAGGGA TAGGCTACAG GAATATGCAC AAATGTTTCT
  TAGAAAAACC CTTAAGTCTG TTAACAAAAT ATTTTGTTTT GTATCAAGAT AAAGTTTAGA
  R
  ACAGTATATT TCTGAGAGAT TTAGAAGTTA GTCAATGAAT GATATAAGTA GGGAAACTTA
  TTTATTTGCA AGATTATAGA ATTTGATCCT TTGAAACACA GTCACAAAGT TAACTCCTGT
  TTCAAAGTTG TTTGCCTTTG TTGTGTTGGG GATTTATATA AACACCATAA CGTTCTTGCA
  AAAAATTCAA AGACAGAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320936363	CHEV_3_125130903	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264142570					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125221634 () rs orientation: forward

Symbol	Name	Function Class
Ndst4	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	Intron
Rr584610	regulatory region 584610	1787 bp distal