rs264157934 SNP Detail

Summary

• ID
  rs264157934
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86762356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGAGCTGTC ACCCGGCCGC CTCTGCCCTT
  CTCCGCGCCC TAGGATTATC CCTCGAATCC CCGGGTCCTG GAGCAGGGGA GGGGACCCGT
  GCGGCCCAGC GTACTCACCC CGCCCCAGGA GCACCGCAGC CCGGACGCCG CGCGAGGTAG
  S
  TGAGTGCAGA CACGCACCGC CCTGGTGTCC CCGGGCCGCG ATGCCTGTAG ccccggcccg
  gcccctgtct cagctccgcg gtccccgcgg tccccacccg ccgccgcctc cgccagcgcc
  gccgcgtctc tctagcgctc ggcgcagcgt                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323058453	CHEV_9_86775138	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264157934					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86762356 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22106	CpG island 22106	within coordinates
Rr684153	regulatory region 684153	within coordinates
Rr684154	regulatory region 684154	101 bp proximal
Snap91	synaptosomal-associated protein 91	within coordinates
Tssr90794	transcription start site region 90794	62 bp downstream
Tssr90795	transcription start site region 90795	100 bp downstream
Tssr90796	transcription start site region 90796	111 bp downstream
Tssr90797	transcription start site region 90797	178 bp downstream
Tssr90798	transcription start site region 90798	188 bp downstream
Tssr90799	transcription start site region 90799	344 bp downstream
Tssr90800	transcription start site region 90800	395 bp downstream