rs264171783 SNP Detail

Summary

• ID
  rs264171783
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:135716540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG GGATGGGTAG GGGCTGAGAA
  Y
  GGAAACACGC CTGCCTGCTT ATCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319993382	CHEV_1_137685379	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264171783					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135716540 () rs orientation: forward

Symbol	Name	Function Class
Rr419276	regulatory region 419276	509 bp distal
Rr419277	regulatory region 419277	802 bp distal
Rr419278	regulatory region 419278	within coordinates
Rr419279	regulatory region 419279	145 bp proximal
Rr419280	regulatory region 419280	932 bp proximal
Rr419281	regulatory region 419281	1203 bp proximal
Tnni1	troponin I, skeletal, slow 1	Intron