rs264207935 SNP Detail

Summary

• ID
  rs264207935
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:63217812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTTGTAA TCCCAGTATT
  GAGGATCATC CTGTGCTACA CAGTGAGCTC TAGGCCAGCG TAGGCTATGC GAGACCAGTC
  TCCAAAACAA CCAAACCACA CAGAGAAATG ACAACGACAA CCAAACAGCT TTGAAGAATT
  ATATATATAA CTTTTCCTTT GATAGATCCT GCTCTTGGAC ACTGGTAACT TTGGCAGCAG
  R
  ACGGAAAGGG ATTGTGTCCC ATTTTATAGG TGGAGGGATG GAAAGGGGGC AGTTAAAATC
  TGCTCGCTTC CCACTGGATT TCAGGCCAGA ATGGATCAGC AAGGTCCTGA GAACTCAGTG
  GTGGGGACCA AGTCGGATTC AGACTAATAT CACAGAACGT TGGACATGGC TCAGATTGTA
  AGAGTGCTTG CAAGCAAGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323333509	CHEV_10_62844781	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264207935					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:63217812 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1649	CpG island 1649	178 bp distal
Cpgi1650	CpG island 1650	299 bp proximal
Dnajc12	DnaJ heat shock protein family (Hsp40) member C12	410 bp upstream
Gm66647	predicted gene, 66647	within coordinates
Rr215754	regulatory region 215754	789 bp proximal
Rr224928	regulatory region 224928	within coordinates
Rr369009	regulatory region 369009	36 bp upstream
Tssr97916	transcription start site region 97916	711 bp downstream