rs264278223 SNP Detail

Summary

• ID
  rs264278223
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3810893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atgttggag gagtcagtgt gaatacaggg
  cctggaggca taaggtgaac tctattttat ttattcttat tgtgaagcta tacttacgta
  aaacatatag cttatttaaG GGGAAAAACC CTCAATGATG TAAAAATAAT TCTTCCTTCA
  Y
  GGTAATGATT ATAATTTTGG CACTATGCCA TATTGTTTTA ACAAATCTCC AAAGCAAGGG
  AGATTAAGAT TAAGATAAAG ATTAGGTGGT CACTAACGTG TTACTTCATT TGATTTAGAG
  AAGGGAGGTT ATATTATGCA ACAGTTGTTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320205204	CHEV_2_3727128	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264278223					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3810893 () rs orientation: forward

Symbol	Name	Function Class
Gm13180	predicted gene 13180	within coordinates
Gm36031	predicted gene, 36031	within coordinates
Rr550967	regulatory region 550967	541 bp proximal
Tssr15925	transcription start site region 15925	339 bp upstream