rs264281393 SNP Detail

Summary

• ID
  rs264281393
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121068564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTCACTG TCCCCACTGA
  GACATCTCAC TATCCCCACT GAGTCATCTC ACTGCCCCCC ACTCAGCTAT CTTAATGTCC
  CCCCACTGAG CTATCTCATT GTCCCCCCAC TTGGCATTTA TAATTGGACC AAGTTTTAGG
  CATCCCCAGA AGTTTTATTA CACTGATTAT TTCAGTGCAA ATCAGGACAA AGTATTGACA
  Y
  CTCTCAGGTT GTTTAATTAA ACTATGATTA TTTTAAATGA ACAACCGATA GTCTCTCTAC
  AATGTGCCAT TCTTCTAGGT AACGAGGACA GTGTTGATCA TCAACAGCAG ACAGCACATG
  GGACTTGCTA GTGGTGTTCA GAGCGGGCAG CTTTCTCCCA GCAATGCTAA CCCAAGGTCG
  AGTTCACTAA TTAGCCACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851445	CHEV_14_121230374	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264281393					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121068564 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	770 bp proximal
Rr287002	regulatory region 287002	1564 bp distal
Rr287003	regulatory region 287003	437 bp proximal
Rr390218	regulatory region 390218	910 bp upstream
Rr404289	regulatory region 404289	648 bp upstream