rs264285573 SNP Detail

Summary

• ID
  rs264285573
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:65133979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctttcctt cctctttctt tctttctttc
  tttctttctt tctttctttc tttctttctc tctctctctc tctctctctc tctttctttc
  tttctttctt tctttctctt tctttctttc ttttgtcctt ccttcctctt ccttcctctt
  Y
  ctttctttct ttctttcttt ctttctttct ttctttcttt ctctctctct ctctctctct
  ttctttcttt ctctttcttt cttcttttct tttcttttct tttcttttct ttcctttcat
  ttccttccct ttcccttcct tcctttcatt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323712867	CHEV_11_65056655	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264285573					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:65133979 () rs orientation: forward

Symbol	Name	Function Class
Myocd	myocardin	within coordinates
Rr251029	regulatory region 251029	276 bp proximal
Tssr108467	transcription start site region 108467	396 bp downstream
Tssr108468	transcription start site region 108468	417 bp downstream
Tssr108469	transcription start site region 108469	483 bp downstream
Tssr108470	transcription start site region 108470	503 bp downstream