rs264292537 SNP Detail

Summary

• ID
  rs264292537
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:107698893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAATTTTT ATTTGTAGAA
  TTGAAAAAAC AGTGAGAGCT GCCCAAGCAA TGATGGTGCA CACTTTTAAT CCCAGCGCTT
  GAGAGGCAGA AGCAGGAAGA TCTATGAGTT AGAGAACAGC CTGGTCTACG GAGCAAGTTC
  TGGAACAGCC ATAGATACAC AGAAAAACAC AGTCAAGAGA AGGAAGAGGA GGAAGAGGAG
  A
  AAGAGGAAGA AGAGGGGGAA GAGGGGGAAG GGGGAGGGGA GAGGGGGAGA GAGGGAGAGG
  GGGAGAGGGG GGAGAGGGGG AGAGGGGGAG AGGGGGGAGA GGGAGAGAGG GAGAGACAGA
  GAGCACTGAT GCAAATACAC CTTTAAAAGA ATTCAACAGT CCACAGACTC ACTATGTTGT
  CATTTCCTGA TTCTACAAGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CAST/EiJ	LP/J	PL/J	SEA/GnJ	ZALENDE/EiJ
ss389866907	MGP_WTSI_13_108352473	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CAST/EiJ	LP/J	PL/J	SEA/GnJ	ZALENDE/EiJ
rs264292537					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss389866907	MGP_WTSI_13_108352473	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:107698893 () rs orientation: forward

Symbol	Name	Function Class
Gm31920	predicted gene, 31920	within coordinates
Gm32004	predicted gene, 32004	within coordinates
Rr278138	regulatory region 278138	618 bp distal