rs264300652 SNP Detail

Summary

• ID
  rs264300652
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147018391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATC CAGGTGTGTG CAAATATGAC
  Y
  AAAACATATC AGATAGGTTA GACAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320548140	CHEV_2_147002207	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264300652					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147018391 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12376	CpG island 12376	1822 bp proximal
Nkx2-2	NK2 homeobox 2	1075 bp downstream
Rr566759	regulatory region 566759	1131 bp proximal
Rr566760	regulatory region 566760	1403 bp proximal
Rr566761	regulatory region 566761	1797 bp proximal