rs264344991 SNP Detail

Summary

• ID
  rs264344991
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:119822464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCATCTTT ATTCACATCT
  CCATGCTTTC AAGTAGAGCT GGCTGCAAAG TTTTTTTTTT TTTTTCTGAT GGAGGGGGTG
  GGATCGGGAG TACTCCTAAC TATTTTCACC AAAATTGGGG AGGTAATGGC CCTTCCGGGC
  TCCACTTGAA ATTCCCTAAA CTCTTGACAC CCCCAGAGGG GTTGAGATTG TTGTGTGAGT
  R
  GGGGGGGGGG GGGAACGGCC TTGCGGAGGC CACCATAGAA CCGTCCTAAT TTTTCATAGA
  CTCTGGCATC TTACTAACCC ATGTGAGGTT TTCATTGTTC ATCTTTATGG TGTTTTGGAT
  TGGTGTACTG AGAGGGACTT GGTTCAAACG ACCATGAAAG GCAAAACAAA ACAAAAAATT
  AAAAAAAAAA ACAAAAAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321665996	CHEV_5_120134408	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264344991					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:119822464 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16459	CpG island 16459	1333 bp distal
Rr619145	regulatory region 619145	348 bp proximal
Tbx3	T-box 3	within coordinates
Tbx3os2	T-box 3, opposite strand 2	689 bp downstream
Tssr1618	transcription start site region 1618	131 bp upstream