rs264382848 SNP Detail

Summary

• ID
  rs264382848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105721698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCACACA ATAAACATAC
  ATAAGACGGC TGGGGATGTA GGTCAGTGGT AGAACTACAT GCCTGGCACA CACAAGGCCC
  TGGAATTTAA GCACCAGAAT CAAAGAGCTT CCTGTCTGAG ACATACATGA GGTTTGCTTT
  GCACTTCCAT GGAGCAGTCT GTGAGGTAAA TTGGCTTGGG GGATTTTTAA CTCATCCAAA
  Y
  GATTGGCAAA ACACGAAACT AGGAAAAGCC ACGATCCTCA GGAGGCTGTG TCCTCTCAGA
  ATGGGTCAGG CTTGGACCTC ACTTCCTTGG CTTCTAGCAA TTAGGACCAT TTGGACAAAC
  CCTAAACCCT GCTACCTTCT TCAGCTATGT GGTAGGCCTG CTACCATGCC TGTCTTCCAT
  GTGAGTCAGA GGGGAGTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863273	CHEV_3_105617300	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264382848					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105721698 () rs orientation: forward

Symbol	Name	Function Class
Gm5547	predicted gene 5547	1185 bp upstream
Rr582787	regulatory region 582787	693 bp proximal
Rr582788	regulatory region 582788	1208 bp proximal
Rr582789	regulatory region 582789	1751 bp proximal
Tssr31084	transcription start site region 31084	1148 bp upstream