rs264386562 SNP Detail

Summary

• ID
  rs264386562
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151335478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaCAAGACA CCACCAACAA CACTTGTTCG
  TGTAATCTTT TTAAAATTTT ATGGAGCAAC CAGCAAACAA GCACTCACCT GTCATGTTCA
  ATACTTGTTA AACTGAATAT TTCCATATCA AACTTTGCTA AATATTCATT AACCTGATTA
  Y
  ACTGATCAGT GCTGTGTTGA ATGTTATGCA AAAAGCTAAA TTTGGTGGTG GGGTGTATTT
  TTACTTTAGT TTTTTGGTTT Gttttctgtt tttgagacag ggtctgacta tagctctgac
  tgacctggaa ttcactatgt agactaggct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320056660	CHEV_1_153306857	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264386562					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151335478 () rs orientation: forward

Symbol	Name	Function Class
Rr372239	regulatory region 372239	280 bp upstream
Rr420294	regulatory region 420294	1719 bp proximal
Trmt1l	tRNA methyltransferase 1 like	1566 bp downstream