rs264441749 SNP Detail

Summary

• ID
  rs264441749
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:179983694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCACACAG AAGTATCGAG
  CACCTCCTGA ACCTCATGGG AGGTGAAGGT GTGTGGTGGC ACAGGGAGGT AAACGCAGGT
  GTCATGGTGG GGAGGGCTGT GGGGAGAGGG ACAGGGAGTT TTGCCTTTTT AGACTGTAGG
  GGTCTTTGTG AGGCAGAGAA GCCCACCCAT TCCTGTACCT TGCTTGGGGA ATGCCTCCGT
  S
  CTGTTGCTTA GGCTAGTTTG CAAACAGGCA GTCATGATAG GTGCTCCACT TTGCTTTAAA
  AACTGGAAAG GTTTATGAGA AAATAAAAAT ATCAAAACCA AGGACTGTGA GATCCCTAGC
  ACTTGGGAGG TGGCAGAGGA AGGACCGGAA GTTTGAGATC ATCCTGGGCT TCTTGGAAAA
  GTCAATGCTA GTTTCAGCCG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320631878	CHEV_2_180076606	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264441749					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:179983694 () rs orientation: forward

Symbol	Name	Function Class
Gata5os	GATA binding protein 5, opposite strand	1169 bp downstream
Gm52543	predicted gene, 52543	within coordinates
Gm75553	predicted gene, 75553	within coordinates
Rr572718	regulatory region 572718	1457 bp distal
Rr572719	regulatory region 572719	105 bp distal
Rr572720	regulatory region 572720	1077 bp proximal