rs264493795 SNP Detail

Summary

• ID
  rs264493795
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107562292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAAAGAAA TGTAAATAGA AATAGATCCC
  CAGTTTCAAT GCACAGAGTC GACTCCCCCT TAAGAACTTA AATTGATTAA TTTCAAAATC
  TTTCATGTGT CTCCATATTT AATTTTGGGT AGCATAGGCC TTCACAATGG AGGATTGAAT
  M
  ATTGCTTGAG TTCACTGTAT TAATGAAAAT CTACTGAGTG AGTGAACAAA TACATTTTCT
  CTCTCCCCTT TACATCAAAG GTTGCATTGg ccaagcttgg tagctcacac ctttaatccc
  agcactcggg aaacagaagc aggtggatct                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250208	CHEV_4_107377700	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264493795					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107562292 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Gm57502	predicted gene, 57502	1233 bp upstream
Gm70287	predicted gene, 70287	within coordinates
Rr597045	regulatory region 597045	611 bp distal
Rr597046	regulatory region 597046	696 bp distal
Tssr38261	transcription start site region 38261	1935 bp upstream
Tssr38262	transcription start site region 38262	1961 bp upstream
Tssr38263	transcription start site region 38263	1971 bp upstream
Tssr38264	transcription start site region 38264	1981 bp upstream
Tssr38265	transcription start site region 38265	1999 bp upstream