rs264493968 SNP Detail

Summary

• ID
  rs264493968
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96245145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAGGCAAG GCATACGTAA
  AATAATACAA CCACTGGACT GGGATTAAAG GAGACTGGGC TCTTTTCTTG GCCCCATGGA
  ATATGTAATT TTACAAAGAA TCACAACCTC TGGGTTTCAT TTCTGAACTA GAGGTTGGAA
  TTTAAGAAAA CAAAACAAAA CCCCCCAAAC CTTCCATGGC TCCTTTCAGC TTGTGATAGA
  S
  TGTCAAAGAG CCTTGCACCC TAGAGGAGCT CACTTCAGTG AACAAGTCAT TTTGTGAGCC
  ATATCTCACT TATGGTCTTC AATGCTTCTC TTAAAAATGC CATGCCCCAA CGGCTCTCAG
  CTCTAAAAAT CCATTCTTAC TCAGAATGGA AAAAAAAAAA TCTGTCCTTA CCCATTAACA
  AAATACTCTT AAAAAAGGAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323108157	CHEV_9_96263511	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264493968					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96245145 () rs orientation: forward

Symbol	Name	Function Class
Atp1b3	ATPase, Na+/K+ transporting, beta 3 polypeptide	within coordinates
Cpgi22162	CpG island 22162	411 bp proximal
Gm68867	predicted gene, 68867	within coordinates
Tssr86601	transcription start site region 86601	832 bp upstream
Tssr90956	transcription start site region 90956	1207 bp downstream
Tssr90957	transcription start site region 90957	1315 bp downstream
Tssr90958	transcription start site region 90958	1339 bp downstream