rs264536264 SNP Detail

Summary

• ID
  rs264536264
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121280309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTGAGTGG TGGGCCCCGG CGCGTGCCCG
  TGAGGCCCCG GCGCGTCCCA CACACCGCAG CAGCTGTCTG GGCCCCCGCG CCGCCTCAAA
  CTTGACGCGC GCCGCCAGCA GTCTCGACCG CACCGTCCTC CCGCACCCCC AAGTTAACCT
  R
  CCCCGGGCAG CCGAAGCCCC GCGATGGGGT CGGCGCTGCG GCGGGGGTTG GGGGGACGGT
  CGGGGTCCCA GTTGCGGGGA GGAGGGGCGC TGGTGTGTAC GTGGAGCGGC TCCGGCGTCT
  CACTTTGTAC CTTCTCTTCT TCTTAGGCGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320483214	CHEV_2_121275564	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264536264					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121280309 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12159	CpG island 12159	within coordinates
Gm22953	predicted gene, 22953	842 bp downstream
Gm75262	predicted gene, 75262	within coordinates
Rr55495	regulatory region 55495	within coordinates
Rr55496	regulatory region 55496	1691 bp proximal
Rr397250	regulatory region 397250	412 bp downstream
Serf2	small EDRK-rich factor 2	within coordinates
Serinc4	serine incorporator 4	1349 bp downstream
Tssr19771	transcription start site region 19771	435 bp downstream
Tssr19772	transcription start site region 19772	478 bp upstream
Tssr25936	transcription start site region 25936	367 bp downstream