rs264603831 SNP Detail

Summary

• ID
  rs264603831
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62441525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG TAGATTGCTG GGGAGGGAGA
  R
  AATCTGTAAG TCCGGCCGGG CTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323703948	CHEV_11_62364201	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264603831					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62441525 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3024	CpG island 3024	within coordinates
Gm12279	predicted gene 12279	within coordinates
Gm71785	predicted gene, 71785	within coordinates
Rr246927	regulatory region 246927	within coordinates
Rr386162	regulatory region 386162	within coordinates
Tssr102022	transcription start site region 102022	154 bp downstream
Tssr102023	transcription start site region 102023	99 bp downstream
Tssr102024	transcription start site region 102024	110 bp upstream
Tssr102025	transcription start site region 102025	468 bp upstream
Tssr102026	transcription start site region 102026	535 bp upstream
Tssr102027	transcription start site region 102027	563 bp upstream
Tssr102028	transcription start site region 102028	749 bp upstream
Tssr102029	transcription start site region 102029	762 bp upstream
Tssr102030	transcription start site region 102030	794 bp upstream
Tssr102031	transcription start site region 102031	1022 bp upstream
Tssr102032	transcription start site region 102032	1039 bp upstream
Tssr102033	transcription start site region 102033	1057 bp upstream
Tssr102034	transcription start site region 102034	1075 bp upstream
Tssr102035	transcription start site region 102035	1149 bp upstream
Tssr108430	transcription start site region 108430	241 bp downstream
Tssr108431	transcription start site region 108431	294 bp downstream
Ubb	ubiquitin B	804 bp upstream