rs264622111 SNP Detail

Summary

• ID
  rs264622111
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32305475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAA CAGCTTTGGC TCCGGCACTC
  A
  GGAGGCAGAG GCAGATGGAT CTCTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325136568	CHEV_16_32486743	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264622111					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32305475 () rs orientation: forward

Symbol	Name	Function Class
Gm59898	predicted gene, 59898	1402 bp upstream
Rr514710	regulatory region 514710	1104 bp distal
Rr514711	regulatory region 514711	475 bp proximal
Rr514712	regulatory region 514712	1212 bp proximal
Rr514713	regulatory region 514713	1413 bp proximal
Slc51a	solute carrier family 51, alpha subunit	within coordinates
Tssr4846	transcription start site region 4846	939 bp downstream
Tssr4847	transcription start site region 4847	958 bp downstream
Tssr137989	transcription start site region 137989	1436 bp upstream
Tssr140806	transcription start site region 140806	482 bp upstream
Tssr140807	transcription start site region 140807	495 bp downstream
Tssr140808	transcription start site region 140808	511 bp downstream
Tssr140809	transcription start site region 140809	538 bp downstream
Tssr140810	transcription start site region 140810	568 bp downstream
Tssr140811	transcription start site region 140811	986 bp downstream
Tssr140812	transcription start site region 140812	1010 bp downstream
Tssr140813	transcription start site region 140813	1152 bp downstream
Tssr140814	transcription start site region 140814	1216 bp downstream
Tssr140815	transcription start site region 140815	1240 bp downstream