rs264674093 SNP Detail

Summary

• ID
  rs264674093
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18339023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACTCTCCT GTGGTGGGGA
  AGATGCCCAG AGGTCTGGGT CTCAGCTCTG CCTTCTAGCT GAGGATGAAG GCCCGAAAAG
  ACCCTGTCCA AGAAGCTCTG TTGCTTTTGC TACCCATGTA CTCTTCTGCT TAGACTGGTT
  TCAATGACCC CAAGATCCTG GGTGTGCTAG GGCCCCCTGA GTTCACACCC AAGATGGCAC
  R
  GGGTTAGCGC CAACCAGAAC GAACCTCAGC CAATAGTCAG GCAGGTTTCC TTTGTCCCTG
  TTCCTGCTGG CACAAGACCC TCCAGGATTT TTTGGAGCAG ATGTTGCATT CCACTCACCA
  GGGATCTCAA GATCCTGGGT GTGCTAGGGT GCCTACAGCA TGGAGAGTCC TCTAGGGACC
  TTGGGACCCT CTGTCGAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	KK/HlJ	LG/J	LP/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	RF/J	RIIIS/J	SJL/J	SPRET/EiJ	SWR/J	WSB/EiJ
ss370731517	MGP_WTSI_7_19190447	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	G	G	G	G	G	A	G	A	A	G	G	G	G	G	G	G	G	A	A	G	A	G	G	A	G	G	G	A	G	A	A	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	KK/HlJ	LG/J	LP/J	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	RF/J	RIIIS/J	SJL/J	SPRET/EiJ	SWR/J	WSB/EiJ
rs264674093					SNP	A	A	A	G	G	G	G	G	A	G	A	A	G	G	G	G	G	G	G	G	A	A	G	A	G	G	A	G	G	G	A	G	A	A	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss370731517	MGP_WTSI_7_19190447	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18339023 () rs orientation: forward

Symbol	Name	Function Class
Psg23	pregnancy-specific beta-1-glycoprotein 23	1245 bp downstream
Tssr2096	transcription start site region 2096	1940 bp downstream