rs264693978 SNP Detail

Summary

• ID
  rs264693978
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17462394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTGTGTGTGT GTGTGTGTGT
  R
  TAAAATCCAT CTATTCACCT TCTAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321754658	CHEV_6_17412395	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264693978					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17462394 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17176	CpG island 17176	920 bp proximal
Met	met proto-oncogene	1405 bp upstream
Rr626799	regulatory region 626799	915 bp proximal
Rr626800	regulatory region 626800	1079 bp proximal
Rr626801	regulatory region 626801	1122 bp proximal
Rr626802	regulatory region 626802	1654 bp proximal
Tssr55050	transcription start site region 55050	1037 bp upstream
Tssr55051	transcription start site region 55051	1160 bp upstream
Tssr55052	transcription start site region 55052	1354 bp upstream
Tssr55053	transcription start site region 55053	1431 bp upstream
Tssr55054	transcription start site region 55054	1490 bp upstream
Tssr55055	transcription start site region 55055	1506 bp upstream
Tssr55056	transcription start site region 55056	1532 bp upstream
Tssr55057	transcription start site region 55057	1697 bp upstream
Tssr55058	transcription start site region 55058	1737 bp upstream
Tssr55059	transcription start site region 55059	1776 bp upstream