rs264699651 SNP Detail

Summary

• ID
  rs264699651
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:57764906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATCAGGG GCATGTGGGC
  AAAACCTCAT TACTGAGAAG CGAGAAAGAG AGAAAAAGGA AGTGGTCAGA GTACCACAGT
  CTCCTCCGTG TGCACACTTA GTGACCCAAA GGCCTCCAGC AGCTGGGTCT CACCTTCAAA
  GGCGCCACTA CCTTCCAATA GCAGCACCCT GAGGAGCAAG CCTTTGCCAC GGGGGGGGGG
  T
  GGGTGGGGGG GGGGTGACGG ACGACTTAAG TTACAAACTG TAGCAAGTAA GAGATGTAGG
  GCCCAGCAGG CATGCTGCGG TGCTTCCAGG AGACAAGGAG GGCCTCAGCT GAGGCGGCAG
  AGTGGAAAGA GACAGGAACA AGGATACTGA AAAGGGAGGG CTGGCTGAGT AGCTGGCTGA
  GTAGCAGGAA GGGGTGAGGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CE/J	NON/ShiLtJ	QSi5/Ianm	RIIIS/J	SPRET/EiJ
ss391194865	MGP_WTSI_14_58146286	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CE/J	NON/ShiLtJ	QSi5/Ianm	RIIIS/J	SPRET/EiJ
rs264699651					SNP	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss391194865	MGP_WTSI_14_58146286	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:57764906 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6542	CpG island 6542	1396 bp distal
Il17d	interleukin 17D	within coordinates
Rr389707	regulatory region 389707	1962 bp upstream
Rr404129	regulatory region 404129	1659 bp downstream
Rr492826	regulatory region 492826	1937 bp proximal
Tssr128966	transcription start site region 128966	1982 bp upstream
Tssr128967	transcription start site region 128967	1924 bp upstream
Tssr128968	transcription start site region 128968	1804 bp upstream