rs264700524 SNP Detail

Summary

• ID
  rs264700524
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:41496019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT TTCTTTCTTT CTTCTTTCTT
  C
  CTTCCTTTCT TCTTTAAGGA GGCAT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322927336	CHEV_9_41392806	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264700524					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:41496019 () rs orientation: forward

Symbol	Name	Function Class
Gm28119	predicted gene 28119	1871 bp downstream
Gm69589	predicted gene, 69589	within coordinates
Mir100hg	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene	within coordinates
Rr677068	regulatory region 677068	164 bp distal
Rr677069	regulatory region 677069	65 bp proximal
Tssr84528	transcription start site region 84528	1681 bp downstream
Tssr84529	transcription start site region 84529	308 bp downstream
Tssr84530	transcription start site region 84530	668 bp upstream
Tssr84531	transcription start site region 84531	1762 bp upstream