rs264718149 SNP Detail

Summary

• ID
  rs264718149
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:46847097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAAAACAT TCAGAGGATC AGAAAGCGAA
  ACTTCCAAGG GCTTGGTGGG CCCTAGTTGT TCTCCAGTGA CCCTGAAGTT GTCTGTAAGA
  AAAGAAAAGA GAAAGCTGTG TAAGAATTTT TGCACAGAGC ATATAAGCTG TTGTGACAAG
  Y
  cagcagttct caaattatgt atgggtcatg accccacacc ttccaaagac catgggaaga
  ccatattcac attacaattc ataacagtag caaaatgaca gttatgaagt agcaacgaga
  ataattttat ggttgggtgt gtgtgtgtgt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325609949	CHEV_18_46873684	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264718149					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:46847097 () rs orientation: forward

Symbol	Name	Function Class
Cdo1	cysteine dioxygenase 1, cytosolic	within coordinates
Rr393660	regulatory region 393660	within coordinates
Tssr153260	transcription start site region 153260	618 bp upstream
Tssr153261	transcription start site region 153261	458 bp upstream
Tssr153262	transcription start site region 153262	1702 bp downstream