rs264722396 SNP Detail

Summary

• ID
  rs264722396
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107342332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAG CATTAAAAGC GCCGGGGGGG
  K
  GGGCGGGGGG GGGGTACCTC CTAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CE/J	KK/HlJ	LP/J	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SJL/J	ST/bJ	WSB/EiJ	ZALENDE/EiJ
ss916342919	MGP_WTSI_3_107435016	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CE/J	KK/HlJ	LP/J	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SJL/J	ST/bJ	WSB/EiJ	ZALENDE/EiJ
rs264722396					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916342919	MGP_WTSI_3_107435016	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107342332 () rs orientation: forward

Symbol	Name	Function Class
Rr582971	regulatory region 582971	922 bp distal
Rr582972	regulatory region 582972	891 bp distal
Rr582973	regulatory region 582973	1449 bp proximal