rs264757132 SNP Detail

Summary

• ID
  rs264757132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:101829467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTTAGTT CTTGAACCTC
  TGAGACCTGG ACTCACTGGA CCAACCGTGC AGCATAAACC ATCCTGGCGT CTCCAGCTTC
  TGCCTCTCTT TCTAGGCACT GTCTCCCCAG GCCCAAGAGC ATCCCTTGAG AGTTGAAGTA
  TATTACATTA ACTGGGAGAA TTTATTGAGC GCTGACTGTG CCCCAGACTC TCTGCGGTGT
  Y
  TTGACAAACA CTGTCCACTT CATCTGGTGC TGGAGGTGGG TACTACCCTT CCTTAGAGTT
  CATAGAGGAA AGGGGTTCCA CGTGATCTTG TGGGGCTTGC CTGAGATCCA AGTTGTAAGA
  ATAAATTCCC ACCAGCGTGG CTAAACAGCC TTCCCAAAGT CCGTGGGCGT GGCGTCTGAG
  ACAGAAGGGT ATGATGTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323834281	CHEV_11_101799955	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264757132					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:101829467 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3890	CpG island 3890	980 bp distal
Gm33662	predicted gene, 33662	656 bp upstream
Gm74450	predicted gene, 74450	within coordinates
Rpl27-ps2	ribosomal protein L27, pseudogene 2	860 bp upstream
Rr457131	regulatory region 457131	685 bp distal
Rr457132	regulatory region 457132	566 bp distal
Tssr105164	transcription start site region 105164	1956 bp downstream