rs264773644 SNP Detail

Summary

• ID
  rs264773644
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16610911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGGGCTC TTTCTCGAGG
  TAGCTGACCA TGAGGGTGGG GGTGGGGGCA GAGAAGGGAA GTAGTGGTTT TCCTGGTAAA
  CAGAAAGCTA CCTTAAGGGC TCCCTGTGGG ATGCTGAGTT TGGGTTTCTG CTTACCCAGA
  AAATGGAGTC CTGCTCAGGA CACTGTCAGC AGCACTGCTA GTTTCAGGGG GGGGGGGGGG
  T
  GGAGACACCC ACTTTGTACC TAGTAATACC ACATAAATCA GTATCCCCTC TAGAATACTC
  TTATTTTTAT TAAATAAAAG AATTTAAGAA CAGACTCCAA TTGAATCTCA AGGACAATTT
  TATTAAAGTT TAAAAGAAAA ACCCCCAGAG CAAACATGCT GTGAACCTTG GCAGCTGTCC
  AAAGGAGAAC AAAGAAGGGC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BR/cdJ	C57L/J	C58/J	CBA/J	FVB/NJ	I/LnJ	KK/HlJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J
ss348753305	MGP_WTSI_1_16530768	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BR/cdJ	C57L/J	C58/J	CBA/J	FVB/NJ	I/LnJ	KK/HlJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J
rs264773644					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss348753305	MGP_WTSI_1_16530768	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16610911 () rs orientation: forward

Symbol	Name	Function Class
Rr13840	regulatory region 13840	1711 bp distal
Ube2w	ubiquitin-conjugating enzyme E2W (putative)	101 bp downstream