rs264818184 SNP Detail

Summary

• ID
  rs264818184
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129228575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGTCAAAGG CCGCTAAAAT GTTTTTAAAA
  GACAAATCAA GTTAGCGAAC GTAAACGGAA AGGGCACAAA CCTCTCCAAG CCACCGGCGT
  AGCGCCCGGA TTTTGACAAC GAAATGGAGA TTCATCTTAA TCTCCCAGGT CGCGGGCACC
  R
  ACGCCACTCT CGGCCGCGGC GGGCCGGAAG TCCTGGGGCC ACCCCAGCCG GACACTCCGT
  TACTCCTTCG GGGGCCGATG GTGTCCAACC CCGAACGAAG CACGGTGGCG CGCGCCAAGT
  CCGCCAAACC CGGGGAGGAG ACCTGCGCAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321312037	CHEV_4_129012026	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264818184					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129228575 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14889	CpG island 14889	within coordinates
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Rr367701	regulatory region 367701	577 bp upstream
Rr367702	regulatory region 367702	1025 bp upstream
Rr600200	regulatory region 600200	539 bp proximal
Rr600201	regulatory region 600201	578 bp proximal
Rr600202	regulatory region 600202	1959 bp proximal
Tssr39141	transcription start site region 39141	811 bp upstream
Tssr39142	transcription start site region 39142	1180 bp upstream
Tssr39143	transcription start site region 39143	1234 bp upstream
Tssr43492	transcription start site region 43492	461 bp downstream
Tssr43493	transcription start site region 43493	515 bp downstream
Tssr43494	transcription start site region 43494	542 bp downstream
Zbtb8os	zinc finger and BTB domain containing 8 opposite strand	750 bp upstream