rs264898882 SNP Detail

Summary

• ID
  rs264898882
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153622537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCTCGAAC TCAGAAATCC
  ACCAGCCTCT GCCTCCCAAA TACTGGGATT AAGGGCATGC GCCACCACCA CCCAGCTATG
  TGTGAGTGTT TTATCGGCAT GTATGTCTAT GTATTGTGGG TGTAGTGCCT AAGGAGGTCA
  GAGGAGAACA TCAGATCCTC TAGAACAGTA GTTACAGTCG GTTGTGGGTT GCCATCTTGG
  G
  TGCTAGGAAT TGAGTGCAGC TCCTCTGCGG GAGTTTTTAA CTGCTGAGCC ATCTCTCCAG
  CCCTGCCAGG TCCCTTTCAA GGCCAATACA ATTCATATAG TTAACAGAAA TGTACTTTAG
  ATACACTTTT GCATTAGGTT TCTGCCGTTT TCCGTGGCTC TTTTTCCAGT ACCACATCCT
  GTCTCTTGTG TTTCCTTTTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320565080	CHEV_2_153606353	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264898882					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153622537 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12494	CpG island 12494	1263 bp distal
Efcab8	EF-hand calcium binding domain 8	within coordinates
Gm75501	predicted gene, 75501	884 bp upstream
Rr567738	regulatory region 567738	895 bp distal
Rr567739	regulatory region 567739	794 bp distal
Tssr20916	transcription start site region 20916	1382 bp downstream
Tssr20917	transcription start site region 20917	1366 bp downstream
Tssr20918	transcription start site region 20918	1338 bp downstream