rs264925894 SNP Detail

Summary

• ID
  rs264925894
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:38125096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACATAGCC TGATGCACAC
  TTGCCTGTGT TGGTCACTCC CTTAGCCCAT ACAAAGGAAG AATGAAAACC TGGGAACCAT
  GAATCTTGTT GCTTGCCACA CTAGAGGGAG GCTCACTCTG ACTTCTCAAT ATGGGCCTTG
  AAGGTTGCCT CCCATTGGGA GACTTGAGCC TGCTCCCCCC CTCCCCCGCC CTCCCCCCTC
  C
  CCCCTACACA CACGCCCAGG TCCATCTCCT CACCCTCTCA GTTCTACCTG CCAGGCTATC
  CAGTAGTGCT TTTTCTCTGG TTCATTTAGG TATTGCTTGC TGTGCCTTAG AAATGTTGTG
  GTGTTAACAG TTTTTATTGT CTTGCTTCAA ACACATGTAT CTTGGTTTCA TTGTTAACTT
  ATTTTTAGTC TCTTGATGAC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10SnJ	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	LG/J	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss388305620	MGP_WTSI_13_38032989	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10SnJ	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	LG/J	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs264925894					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss388305620	MGP_WTSI_13_38032989	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:38125096 () rs orientation: forward

Symbol	Name	Function Class
Rr283322	regulatory region 283322	within coordinates
Rr388285	regulatory region 388285	1971 bp upstream
Rreb1	ras responsive element binding protein 1	within coordinates