rs264955114 SNP Detail

Summary

• ID
  rs264955114
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:53379075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAAAGGT GTGTCAGTGG
  CAGCGTTTGA GCATTCTGTA AAGTTAGGGT ATGCCACTTG GAAAGATGAA AGAATACATG
  TATTTAGCTC TATACTTATA AGAAGCATAG CCTTTAAAAA TGTATAATAT AGACAAAAAC
  AGGGCCTTGT ACATTTCTTT TTTGTTTTAA TAAACCTTTT TGTTTATTGA GCATATTCAC
  R
  CATATCCATT CTATTTGAAT ATGTTGTACA TGTACATGTA CATACTGTGT GTGTGTTTGT
  GTGTATGTGT TTGTGTGTGT GTGTGTTTTT GTGTGTGTGT GTTTTACTCT GTTGGTGAAA
  ACTCAGTGTA AAGGAGTCAT GGTCCTTCAT TAAGTTTCCA TACAAGGCTG GTAAATTTAG
  TTGTGAACTA AATTTGGATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324042719	CHEV_12_54433279	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264955114					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:53379075 () rs orientation: forward

Symbol	Name	Function Class
Npas3	neuronal PAS domain protein 3	within coordinates
Rr267616	regulatory region 267616	1676 bp distal
Rr267617	regulatory region 267617	475 bp distal