rs264965874 SNP Detail

Summary

• ID
  rs264965874
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58893162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGGG CTTTGTTAGC AGGGCTCAGA
  Y
  TGGGATGAGA GTCTAGGTTC GGACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323695601	CHEV_11_58815838	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264965874					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58893162 () rs orientation: forward

Symbol	Name	Function Class
Gm10435	predicted gene 10435	574 bp upstream
Obscn	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	within coordinates
Tssr101782	transcription start site region 101782	584 bp upstream
Tssr101783	transcription start site region 101783	621 bp upstream
Tssr101784	transcription start site region 101784	638 bp upstream
Tssr108189	transcription start site region 108189	143 bp upstream
Tssr108190	transcription start site region 108190	105 bp upstream
Tssr108191	transcription start site region 108191	19 bp downstream
Tssr108192	transcription start site region 108192	38 bp downstream
Tssr108193	transcription start site region 108193	55 bp downstream
Tssr108194	transcription start site region 108194	85 bp downstream