rs264982788 SNP Detail

Summary

• ID
  rs264982788
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16347896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAC AGGTAAGGTA GAAGGGCCAC
  R
  GATATTCAAA GTGAGCGTCA GAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322111620	CHEV_7_17199320	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs264982788					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16347896 () rs orientation: forward

Symbol	Name	Function Class
Arhgap35	Rho GTPase activating protein 35	within coordinates
Cpgi18383	CpG island 18383	within coordinates
Gm29443	predicted gene 29443	within coordinates
Rr400125	regulatory region 400125	1404 bp upstream
Rr642706	regulatory region 642706	137 bp distal
Rr642707	regulatory region 642707	within coordinates
Rr642708	regulatory region 642708	1012 bp proximal
Rr642709	regulatory region 642709	1117 bp proximal
Tssr64615	transcription start site region 64615	1636 bp upstream
Tssr70753	transcription start site region 70753	577 bp downstream
Tssr70754	transcription start site region 70754	642 bp downstream
Tssr70755	transcription start site region 70755	699 bp downstream
Tssr70756	transcription start site region 70756	807 bp downstream
Tssr70757	transcription start site region 70757	821 bp downstream
Tssr70758	transcription start site region 70758	878 bp downstream
Tssr70759	transcription start site region 70759	910 bp downstream
Tssr70760	transcription start site region 70760	987 bp downstream
Tssr70761	transcription start site region 70761	1083 bp downstream
Tssr70762	transcription start site region 70762	1102 bp downstream
Tssr70763	transcription start site region 70763	1295 bp downstream