rs265044728 SNP Detail

Summary

• ID
  rs265044728
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11889481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCATCAAGG GGTCTCCATC
  AAAGGGCAGA CACGGGAGAC GACCCAGACC TGGTCTGAGT AATGACTCAA AGGTGCTCTG
  TGGGCCCAGT TTCTTGGTTC TGGCCGTGGC ACTGTGGGCT GGGAGCATGC ACACACCTTC
  CCTCGGAACT CACTGGGGAC CTGAGCCCTG GGCTGTTTGG GACCTGGGTC CCTGCCTCTG
  Y
  CGAGCCCAGG TGTTCCTGCA GCTCAGTTCT GCCCTGTGGC AGGGTTCTGC TCTTGGCGGA
  TTGGAAAAAC TGAGAGCAAG GGAGCCTTGC TAGGCAGTCC CTGGTTTCCC CACCCTCCAC
  ATGCAAGACA GCGGCCAGTT CCTCCACACC TGGCTGTGCT TGCTGCCTCA GTGATGGCTG
  ATAAACAGCT TCACCCCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322494098	CHEV_8_11839481	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265044728					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11889481 () rs orientation: forward

Symbol	Name	Function Class
Gm15875	predicted gene 15875	within coordinates
Rr659647	regulatory region 659647	1750 bp proximal
Tex29	testis expressed 29	1007 bp upstream
Tssr76253	transcription start site region 76253	1020 bp upstream
Tssr76254	transcription start site region 76254	1033 bp upstream
Tssr76255	transcription start site region 76255	1087 bp upstream