rs265063549 SNP Detail

Summary

• ID
  rs265063549
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:93869672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGA CCAGCTTGGA TTCCATACTA
  G
  GACCCTTTCT ATCTCCGAAA AGAAA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323407252	CHEV_10_93496555	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265063549					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:93869672 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi2121	CpG island 2121			1496 bp proximal
Gm49628	predicted gene, 49628			202 bp downstream
Rr402165	regulatory region 402165			1905 bp upstream
Rr437370	regulatory region 437370			928 bp proximal
Rr437371	regulatory region 437371			1885 bp proximal
Tssr95293	transcription start site region 95293			1639 bp upstream
Tssr98985	transcription start site region 98985			1918 bp downstream
Tssr98986	transcription start site region 98986			1961 bp downstream
Tssr98987	transcription start site region 98987			1979 bp downstream
Vezt	vezatin, adherens junctions transmembrane protein			Intron
				Noncoding-Transcript-Variant