rs265081515 SNP Detail

Summary

• ID
  rs265081515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98886569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAC TTACAGGGTA AGCAACCGGA
  Y
  GGTTGCTAGG CAACTGCATC TCTCG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324133994	CHEV_12_100158520	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265081515					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98886569 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4974	CpG island 4974	98 bp proximal
Rr403444	regulatory region 403444	within coordinates
Rr470976	regulatory region 470976	within coordinates
Rr470977	regulatory region 470977	100 bp proximal
Rr470978	regulatory region 470978	1466 bp proximal
Tssr114655	transcription start site region 114655	221 bp upstream
Tssr114656	transcription start site region 114656	257 bp upstream
Tssr114657	transcription start site region 114657	310 bp upstream
Tssr114658	transcription start site region 114658	334 bp upstream
Ttc8	tetratricopeptide repeat domain 8	264 bp upstream