rs265095754 SNP Detail

Summary

• ID
  rs265095754
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126913171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTGCTCTCT ATCTCGGGCT CCCCTTGGAC TCTCTGTGTA
  GCTCAGGCTG TCCTCAAACT TTGAGTCATC CTCCTGCCTC AGCTTCCTCA AAAGAGTGCA
  Y
  CACCTGGCAA AGCTGTGCTC TTCCTAAGTA ATTTGTTCTC TTCTGAGACA GAATTCTTTT
  CACACTAAAT ATGAAGGCGA ACTGAGACCA CTCCACCCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323528886	CHEV_10_126514358	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265095754					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126913171 () rs orientation: forward

Symbol	Name	Function Class
Agap2	ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	within coordinates
Cpgi2335	CpG island 2335	1628 bp proximal
Gm68530	predicted gene, 68530	1601 bp downstream
Rr213500	regulatory region 213500	1971 bp distal
Rr224393	regulatory region 224393	770 bp distal
Rr224394	regulatory region 224394	within coordinates
Tssr96119	transcription start site region 96119	1977 bp downstream
Tssr96120	transcription start site region 96120	1904 bp downstream
Tssr96121	transcription start site region 96121	1584 bp upstream
Tssr96122	transcription start site region 96122	1620 bp upstream
Tssr96123	transcription start site region 96123	1662 bp upstream
Tssr96124	transcription start site region 96124	1686 bp upstream
Tssr96125	transcription start site region 96125	1704 bp upstream
Tssr96126	transcription start site region 96126	1732 bp upstream
Tssr96127	transcription start site region 96127	1738 bp upstream
Tssr96128	transcription start site region 96128	1813 bp upstream
Tssr96129	transcription start site region 96129	1857 bp upstream