rs265107879 SNP Detail

Summary

• ID
  rs265107879
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:94352379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctgaatta tagttgtTTT TCATTGTGGC
  AGTGGCTCtt tgtttgtttt gaaacagggt ttctctatgt agcccacagg ctgtccagga
  actcagagac ctggctgcct ttgctctgat gactgggata aaggtgtgac ccccccccac
  M
  cACACACACA CACCCATCCC ATCCCAGGTA TTTTTATTTG TGGTTGGCTA TATTGTGTTG
  CCTCTTAGAA AAAATATTTT GGGGGTCTGG GATATAGCTC TTTAAGCCAA CGtcaacgtc
  agtcagttaa atagtatggt caagactaca                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325281640	CHEV_16_94773127	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265107879					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:94352379 () rs orientation: forward

Symbol	Name	Function Class
Gm56630	predicted gene, 56630	694 bp upstream
Rr328341	regulatory region 328341	422 bp proximal
Rr392165	regulatory region 392165	within coordinates
Tssr139557	transcription start site region 139557	690 bp upstream