rs265170202 SNP Detail

Summary

• ID
  rs265170202
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72426274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTAATTT TTTTCTAATT
  AATCTAACTT AGTGACTTTC ACTATATTCA AGTAGGCAAC TTCTACATCA CCTTTAAACT
  GTTTGTATAA TATTGAGGAA TGGATTGAAG TAAGATCTCA TCTAGTCTCA TCTAGCTAAT
  AAGGGTTGCA TTTTAAGGAA TTTTGAGACT GAGATGAAAT GTAAGGATTT TGAAAAATAA
  R
  CCAAAAAGCT ATCACAGAGT ATCTTCAAAA TACCTTTTTT TTTTTTTAAA TGAGTTTCTT
  TCCAGGACCA GATAGTGGAA AGGGTCTTGG TGGCAGGCCA TCCCCTGTGA TGTCAGAGCC
  TTGCCAGGCC CCAGAGGGGC TGTAAGCATT TGAGTTGAAC TCTGCTGAAG GGCACTGATA
  GGACACACAA GCAGCTTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343240	CHEV_2_72433987	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265170202					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72426274 () rs orientation: forward

Symbol	Name	Function Class
Rr558998	regulatory region 558998	1739 bp proximal
Tssr18356	transcription start site region 18356	1615 bp upstream