rs265183438 SNP Detail

Summary

• ID
  rs265183438
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67143738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGATTCAGC CCTGACTTCT
  CACTGTGTGG GTGCAGGGGA AACACGGGTT TGAGTGTTTC CAAATGATTG CTTCATCATA
  TTTGGGGTGA AATAAACAAG GGCCAGCTTT AAAAATATTT AATTAAAATG GCACTGGGTA
  GATTTGTAAA ACATGTGTTT CTCTCTATTT TAAGGCAATC AGTATAAAAA GTTCAATTAT
  T
  CATAGGTAGG AAGGCTGGGG GAAGAATTAA CCATGAGCTA ATGTGCTGCT GTTAAACTAG
  GAAAGAGTTT GAAATGAGCA ATCTGCAGAG CAAGATTGAG GACGAGCAGG CCCTCGGCAT
  GCAGCTGCAG AAGAAGATCA AGGAGTTGCA GGTACATCCA TATCTTCTAT CCGTCTAATT
  CATCAGTAAA CGAAAAATGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719222	CHEV_11_67066414	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265183438					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67143738 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Rr449442	regulatory region 449442	886 bp proximal
Tssr3528	transcription start site region 3528	1821 bp upstream
Tssr3529	transcription start site region 3529	1877 bp upstream
Tssr102197	transcription start site region 102197	1992 bp downstream
Tssr102198	transcription start site region 102198	1931 bp downstream
Tssr102199	transcription start site region 102199	1177 bp downstream
Tssr102200	transcription start site region 102200	1026 bp downstream
Tssr102201	transcription start site region 102201	563 bp upstream
Tssr102202	transcription start site region 102202	1085 bp upstream
Tssr102203	transcription start site region 102203	1145 bp upstream
Tssr102204	transcription start site region 102204	1543 bp upstream
Tssr102205	transcription start site region 102205	1761 bp upstream
Tssr102206	transcription start site region 102206	1865 bp upstream
Tssr108529	transcription start site region 108529	1954 bp upstream
Tssr108530	transcription start site region 108530	1952 bp upstream
Tssr108531	transcription start site region 108531	1924 bp upstream
Tssr108532	transcription start site region 108532	1154 bp upstream
Tssr108533	transcription start site region 108533	1002 bp upstream
Tssr108534	transcription start site region 108534	308 bp upstream
Tssr108535	transcription start site region 108535	202 bp upstream
Tssr108536	transcription start site region 108536	1132 bp downstream
Tssr108537	transcription start site region 108537	1144 bp downstream
Tssr108538	transcription start site region 108538	1646 bp downstream
Tssr108539	transcription start site region 108539	1854 bp downstream
Tssr108540	transcription start site region 108540	1914 bp downstream