rs265209944 SNP Detail

Summary

• ID
  rs265209944
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:3684593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCAACAT ATTTTCACTT
  TCTCTGTACT TAAGAAATGG TGTCTTGTCT CTACTGAAAC CAATATTGTG GGGAATAGAT
  AAATACAACA TTACTATGAA ATTCTCCAAG AAAGGTATGA TACCAACTCA GACACATAGA
  ACCCATACAG GAGGATCTGC ATAGCCCATC CATATGGGCC TAACCCTTTG CTTCCCCACC
  M
  GGGAGTCCAT CCCATAATCA GTCACCAAAC ACAGACACTA TTGCATATGC CAGCAAAATT
  TTGCTGAAAG GACCTTGATA TCTCTGTCTC TTGTGAGGTT ATGCCAGTGC CTGGCAAATA
  CAGAAGTGGA TGCTCACAGT CATCTATAGG ATGGAACACA GGGCCCCCAA TTGAGAATCT
  AGAGAAAGCA CCCAAGGAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320633693	CHEV_3_3619533	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265209944					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:3684593 () rs orientation: forward

Symbol	Name	Function Class
Hnf4g	hepatocyte nuclear factor 4, gamma	Intron
Rr573144	regulatory region 573144	453 bp distal