rs265216518 SNP Detail

Summary

• ID
  rs265216518
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96514173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAAACCA CATACTCAAC
  CTTTGCTCTG GGAACATTGC TCTGCAAAAA GTTGGGTCAA GAAAAGGACC ACAGACTCCG
  TCCAGTCCTG TCTGAGACCC AGAGAAATTT TGAGTTTATC ACCAGTTTTG CATTTCAGAA
  TCGGAACGGT GACCTCTTTC CCACTCCCAG AAGCAGGCTT TTTAGAAAGT AGATTGGCCC
  Y
  GGGAAGTTTG TAAATCTTCA ACTAGTTGTT GCCACTATCT TAAGGGAACT ATTTACAGTG
  AGTAAACTGT GTGGATAACA CCCTGGTATG TGAGGAGAGG GATGATTTCC TGGTCCTGAG
  GTTTAACTGC GCTGCCCTAA GAAGGAAGAA ACTGATTTAA TAGAGCAGGG TTGTTCTTTG
  CCAGGTGCTA GAGTCAGCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111051	CHEV_9_96532539	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265216518					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96514173 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	137 bp distal
Rasa2	RAS p21 protein activator 2	508 bp upstream
Tssr86611	transcription start site region 86611	1090 bp downstream
Tssr90973	transcription start site region 90973	1475 bp upstream
Tssr90974	transcription start site region 90974	1220 bp upstream
Tssr90975	transcription start site region 90975	924 bp upstream
Tssr90976	transcription start site region 90976	566 bp upstream